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Marc

Contents 1 v1 2 20030203 v2 3 20030306 v3 4 20030504 v4 5 20030903 v5 6 20031103 v6 7 20031218 v7 8 20040306 v8 9 20040706 v10 10 20041027 v11 11 20050201 v12 12 20050411 v13 13 20050613 v14 14 20050926 v15 15 20060123 v16 16 20060424 v17 17 20060802 v18 18 20061116 v19 19 20070228 v20 20 20070515 v21 21 20070904 v22 22 20071211 v23 23 20080311 v24 24 20080630 v25

v1

Eukaryotic Translation Initiation
Author: Merrick, WC
Reviewer:
DOI:

Oxidative decarboxylation of pyruvate to acetyl CoA by pyruvate dehydrogenase
Author: Birney, E, Schmidt, EE
Reviewer:
DOI:

Citric acid cycle (TCA cycle)
Author: Birney, E
Reviewer:
DOI:

20030203 v2

DNA replication initiation
Author: Davey, MJ, O'Donnell, M
Reviewer:
DOI:

Switching of origins to a post-replicative state
Author: Joshi-Tope, G
Reviewer:
DOI:

Regulation of DNA replication
Author: Catlett, M, Forsburg, S
Reviewer:
DOI:

20030306 v3

20030504 v4

G1/S DNA Damage Checkpoints
Author: Hoffmann, I, Khanna, K
Reviewer:
DOI:

G2/M Checkpoints
Author: O'Connell, M, Walworth, N
Reviewer:
DOI:

G1 Phase
Author: O'Connell, M, Walworth, N
Reviewer:
DOI:

G1/S Transition
Author: O'Connell, M, Walworth, N
Reviewer:
DOI:

S Phase
Author: Matthews, L
Reviewer:
DOI:

G2 Phase
Author: O'Connell, M, Walworth, N
Reviewer:
DOI:

G2/M Transition
Author: O'Connell, M, Walworth, N
Reviewer:
DOI:

M Phase
Author: Matthews, L
Reviewer:
DOI:

M/G1 Transition
Author: O'Connell, M, Walworth, N
Reviewer:
DOI:

Urea synthesis
Author: D'Eustachio, P
Reviewer:
DOI:

Alanine metabolism
Author: D'Eustachio, P
Reviewer:
DOI:

Aspartate, asparagine, glutamate, and glutamine metabolism
Author: D'Eustachio, P
Reviewer:
DOI:

Ornithine and proline metabolism
Author: D'Eustachio, P
Reviewer:
DOI:

Lysine catabolism
Author: D'Eustachio, P
Reviewer:
DOI:

Phenylalanine and tyrosine catabolism
Author: D'Eustachio, P
Reviewer:
DOI:

Carnitine synthesis
Author: D'Eustachio, P
Reviewer:
DOI:

Creatine metabolism
Author: D'Eustachio, P
Reviewer:
DOI:

20030903 v5

Glucose metabolism
Author: Schmidt, EE
Reviewer: D'Eustachio, P
DOI:

Fructose catabolism
Author: D'Eustachio, P
Reviewer:
DOI:

Galactose catabolism
Author: D'Eustachio
Reviewer:
DOI:

Pentose phosphate pathway
Author: D'Eustachio, P
Reviewer:
DOI:

Pyrimidine metabolism
Author: D'Eustachio, P
Reviewer:
DOI:

Histidine catabolism
Author: D'Eustachio, P
Reviewer:
DOI:

Tryptophan catabolism
Author: D'Eustachio, P
Reviewer:
DOI:

RNA Polymerase I Transcription
Author: Comai, L
Reviewer: Gillespie, ME
DOI:

20031103 v6

Mitochondrial Fatty Acid Beta-Oxidation
Author: Gillespie, ME
Reviewer:
DOI:

mRNA Capping
Author: Buratowski, S
Reviewer: Joshi-Tope, G
DOI:

Purine metabolism
Author: Jassal, B
Reviewer: D'Eustachio, P, 0000-00-00
DOI:

20031218 v7

RNA Polymerase III Transcription
Author: Hu, P, Hernandez, N
Reviewer: Joshi-Tope, G
DOI:

20040306 v8

Base Excision Repair
Author: Joshi-Tope, G
Reviewer: Matthews, L
DOI:

DNA Damage Bypass
Author: Gopinathrao, G
Reviewer:
DOI:

DNA Damage Reversal
Author: Pegg, A
Reviewer: Joshi-Tope, G
DOI:

Double-Strand Break Repair
Author: Lees-Miller, S, Thompson, L
Reviewer: Matthews, L, Joshi-Tope, G
DOI:

Nucleotide Excision Repair
Author: Hoeijmakers, JH
Reviewer: Gopinathrao, G
DOI:

Synthesis of cytosolic 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) from D-ribose 5-phosphate
Author: Matthews, L
Reviewer: Jassal, B
DOI:

RNA Polymerase II Transcription
Author: Conaway, J, Conaway, R, Proudfoot, NJ, Reinberg, D, Timmers, H. T. M.
Reviewer: Joshi-Tope, G
DOI:

20040706 v10

Formation and Maturation of mRNA Transcript
Author: Kornblihtt, AR, Proudfoot, NJ
Reviewer: Joshi-Tope, G
DOI:

20041027 v11

Extrinsic Pathway for Apoptosis
Author: Tschopp, J
Reviewer: Gillespie, ME
DOI:

Activation, myristolyation of BID and translocation to mitochondria
Author: Hardwick, JM, Tsujimoto, Y
Reviewer: Gopinathrao, G
DOI:

Intrinsic Pathway for Apoptosis
Author: Alnemri, E
Reviewer: Matthews, L
DOI:

20050201 v12

Mitotic Spindle Checkpoint
Author: Yen, T
Reviewer: Matthews, L
DOI:

Ethanol catabolism
Author: Schmidt, EE
Reviewer: D'Eustachio, P
DOI:

Processing of Capped pre-mRNA
Author: Carmichael, GG, Hammarskjold, ML, Hastings, M, Krainer, AR, Marzluff, WF, Wahle, E, Zhang, Z
Reviewer: Joshi-Tope, G
DOI:

Eukaryotic Translation Termination
Author: Bedwell, DM
Reviewer: Merrick, WC
DOI:

20050411 v13

Formation of Platelet plug
Author: de Bono, B, Pace, N.P., Farndale, R
Reviewer:
DOI:

Formation of Fibrin Clot (Clotting Cascade)
Author: D'Eustachio, P
Reviewer: Brummel, K
DOI:

Dissolution of Fibrin Clot
Author: D'Eustachio, P
Reviewer: Brummel, K
DOI:

Gamma-carboxylation, transport, and amino-terminal cleavage of proteins
Author: D'Eustachio, P
Reviewer: Stafford, DW
DOI:

Eukaryotic Translation Elongation
Author: Anand, M, Balar, BA, Gross, S, Ortiz, PA, Ozturk, S, Pittman, YR, Ulloque, R, Kinzy, TG
Reviewer: Gopinathrao, G
DOI:

20050613 v14

Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis
Author: D'Eustachio, P
Reviewer:
DOI:

Synthesis of GPI-anchored proteins
Author: D'Eustachio, P
Reviewer: Orlean, P
DOI:

Transcription from mitochondrial promoters
Author: Gustafsson, C
Reviewer: Matthews, L
DOI:

20050926 v15

PKA-mediated phosphorylation of key metabolic factors
Author: Gopinathrao, G
Reviewer: Rush, MG, D'Eustachio, P
DOI:

Insulin effects increased synthesis of Xylulose-5-Phosphate
Author: Gopinathrao, G
Reviewer: Rush, MG, D'Eustachio, P
DOI:

ChREBP activates metabolic gene expression
Author: Gopinathrao, G
Reviewer: Rush, MG, D'Eustachio, P
DOI:

Transport of Mature Transcript to Cytoplasm
Author: Joshi-Tope, G
Reviewer: Hammarskjold, ML
DOI:

20060123 v16

Electron Transport Chain
Author: Jassal, B
Reviewer: Ferguson, SJ
DOI:

DNA strand elongation
Author: Tom, S, Bambara, RA
Reviewer:
DOI:

20060424 v17

DNA Replication Pre-Initiation
Author: Davey, MJ, O'Donnell, M
Reviewer: Tye, BK
DOI:

APC/C-mediated degradation of cell cycle proteins
Author: Lorca, T, Castro, A
Reviewer: Matthews, L
DOI:

Glucagon signalling in metabolic regulation
Author: Gopinathrao, G
Reviewer:
DOI:

PP2A-mediated dephosphorylation of key metabolic factors
Author: Gopinathrao, G
Reviewer:
DOI:

Triacylglyceride Biosynthesis
Author: Gopinathrao, G
Reviewer:
DOI:

Lipoprotein metabolism
Author: D'Eustachio, P
Reviewer:
DOI:

I-SMAD recruits type I receptor phosphatase and ubiquitin ligases to mediate receptor downregulation
Author: Heldin, CH, Moustakas, A, Huminiecki, L, Jassal, B
Reviewer:
DOI:

20060802 v18

HIV Life Cycle
Author: Bukrinsky, M, D'Eustachio, P, Gillespie, ME, Gopinathrao, G, Iordanskiy, S, Morrow, MP, Matthews, L, Rice, AP
Reviewer: Joshi-Tope, G
DOI:

Extension of Telomeres
Author: Blackburn, EH, Seidel, J
Reviewer: Price, C
DOI:

Packaging Of Telomere Ends
Author: Blackburn, EH, Seidel, J
Reviewer: Price, C
DOI:

20061116 v19

Host Interactions with Influenza Factors
Author: Luo, F, Squires, B, Scheuermann, RH
Reviewer: Gale M, Jr
DOI:

Host Interactions of HIV factors
Author: Matthews, L
Reviewer: Benarous, R, Zhao, RY, Peterlin, BM
DOI:

Ketone Body Metabolism
Author: Gopinathrao, G
Reviewer: D'Eustachio, P
DOI:

20070228 v20

Hexose uptake
Author: D'Eustachio, P
Reviewer: Wright, EM
DOI:

Gap junction trafficking
Author: Gilleron, J, Segretain, D, Falk, MM
Reviewer: Matthews, L
DOI:

Heme biosynthesis
Author: Jassal, B, D'Eustachio, P
Reviewer: Sassa, S
DOI:

20070515 v21

Digestion of dietary carbohydrate
Author: D'Eustachio, P
Reviewer: Nichols, BL
DOI:

DINR-mediated activation
Author: Jassal, B
Reviewer:
DOI:

Regulation of gap junction activity
Author: Gilleron, J, Segretain, D, Falk, MM
Reviewer: Matthews, L
DOI:

Influenza Life Cycle
Author: Squires, B, Scheuermann, RH, Bortz, E, Steel, J, Marsh, G
Reviewer: Garcia-Sastre, A, Squires, B, Rush, MG
DOI:

Digestion of dietary lipid
Author: D'Eustachio, P
Reviewer:
DOI:

Steroid metabolism
Author: Jassal, B
Reviewer:
DOI:

Branched-chain amino acid catabolism
Author: D'Eustachio, P
Reviewer:
DOI:

snRNP Assembly
Author: Gillespie, ME
Reviewer: Luhrmann, R
DOI:

Phase 1 functionalization
Author: Jassal, B
Reviewer:
DOI:

Phase II conjugation
Author: Jassal, B
Reviewer:
DOI:

mRNA Editing
Author: Carmichael, GG
Reviewer: Gopinathrao, G
DOI:

Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane
Author: D'Eustachio, P
Reviewer:
DOI:

Synthesis of deoxyribonucleoside 5'-diphosphates from ribonucleoside 5'-diphosphates
Author: D'Eustachio, P
Reviewer:
DOI:

Hydrolysis of nucleoside 5'-monophosphates to nucleosides plus orthophosphate
Author: D'Eustachio, P
Reviewer: Rush, MG
DOI:

Phosphorylation of nucleosides to form nucleoside 5'-monophosphates
Author: D'Eustachio, P
Reviewer: Rush, MG
DOI:

Reversible phosphorylation of nucleoside monophosphates
Author: D'Eustachio, P
Reviewer:
DOI:

Reversible phosphorylation of nucleoside diphosphates
Author: D'Eustachio, P
Reviewer:
DOI:

Transport of Notch receptor precursor to golgi
Author: Jassal, B
Reviewer: Joutel, A
DOI:

Mature Notch receptor trafficks to plasma membrane
Author: Jassal, B
Reviewer: Joutel, A
DOI:

Notch receptor binds with a ligand
Author: Jassal, B
Reviewer: Joutel, A
DOI:

Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor
Author: Jassal, B
Reviewer: Joutel, A
DOI:

A third proteolytic cleavage releases NICD
Author: Jassal, B
Reviewer: Joutel, A
DOI:

NICD trafficks to nucleus
Author: Jassal, B
Reviewer: Joutel, A
DOI:

FGFR ligand binding and activation
Author: de Bono, B
Reviewer: Mohammadi, M
DOI:

Degradation of beta-catenin by the destruction complex
Author: Kimelman, D
Reviewer: Pagano, M
DOI:

20070904 v22

Translocation of BoNT Light chain
Author: Krupa, S, Gopinathrao
Reviewer: Ichtchenko, K
DOI:

Proteolytic cleavage of SNARE complex proteins
Author: Krupa, S, Gopinathrao, G
Reviewer: Ichtchenko, K
DOI:

AMP inhibits the activation of fatty acid metabolism genes
Author: Gopinathrao, G
Reviewer: D'Eustachio, P
DOI:

Activated AMPK stimulates fatty-acid oxidation in muscle
Author: Gopinathrao, G
Reviewer: D'Eustachio, P
DOI:

Import of palmitoyl-CoA into the mitochondrial matrix
Author: Gopinathrao, G
Reviewer: D'Eustachio, P
DOI:

Golgi to ER Retrograde Transport
Author: Gillespie, ME
Reviewer: Rush, MG
DOI:

Metabolism of water-soluble vitamins and cofactors
Author: Jassal, B
Reviewer: D'Eustachio, P
DOI:

Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
Author: de Bono, B
Reviewer: Trowsdale, J
DOI:

20071211 v23

Signaling by BMP
Author: Huminiecki, L, Moustakas, A
Reviewer: Heldin, CH
DOI:

Cell surface interactions at the vascular wall
Author: Ouwehand, W.H.
Reviewer: Zwaginga, JJ
DOI:

NGF processing
Author: Nasi, S, Annibali, D
Reviewer: Greene, LA
DOI:

Activation of TRKA receptors
Author: Nasi, S, Annibali, D
Reviewer: Greene, LA
DOI:

TRKA signalling from the plasma membrane
Author: Nasi, S, Annibali, D
Reviewer: Greene, LA
DOI:

20080311 v24

Generic Transcription Pathway
Author: Caudy, M
Reviewer: Freedman, LP
DOI:

Regulation of pyruvate dehydrogenase complex (PDC)
Author: Gopinathrao, G
Reviewer: D'Eustachio, P
DOI:

ER to Golgi Transport
Author: Gillespie, ME
Reviewer: Rush, MG
DOI:

eNOS activation and regulation
Author: Hemish, J
Reviewer: Enikolopov, G
DOI:

Hypusine synthesis from eIF5A-lysine
Author: Johansson, HE
Reviewer: Jassal, B
DOI:

MicroRNA biogenesis
Author: Gopinathrao, G, May, B
Reviewer: Karginov, F, Hannon, GJ
DOI:

EGFR interacts with phospholipase C-gamma
Author: Jassal, B
Reviewer: Heldin, CH
DOI:

Grb2 events in EGFR signaling
Author: Castagnoli, L
Reviewer: Heldin, CH
DOI:

Shc events in EGFR signaling
Author: Castagnoli, L
Reviewer: Heldin, CH
DOI:

Gab1 signalosome
Author: Castagnoli, L
Reviewer: Heldin, CH
DOI:

EGFR downregulation
Author: Castagnoli, L
Reviewer: Heldin, CH
DOI:

Insulin Receptor signalling cascade
Author: Bevan, AP
Reviewer: Barroso, I, Stanley, FM
DOI:

Insulin receptor recycling
Author: Bevan, AP
Reviewer: Barroso, I, Stanley, FM
DOI:

VEGF ligand-receptor interactions
Author: Krupa, S, Gopinathrao, G
Reviewer: Claesson-Welsh, L
DOI:

Innate Immunity Signaling
Author: de Bono, B, Gillespie, ME, Luo, F, Gay, NJ
Reviewer: D'Eustachio, P, Gale M, Jr, Gay, NJ
DOI:

TCR signaling
Author: Rudd, C.E., de Bono, B, Garapati, Phani Vija
Reviewer: Trowsdale, J
DOI:

Retrograde neurotrophin signalling
Author: Nasi, S, Annibali, D
Reviewer: Greene, LA
DOI:

Nuclear Events
Author: Nasi, S, Annibali, D
Reviewer: Greene, LA
DOI:

20080630 v25

Glutamate Neurotransmitter Release Cycle
Author: Mahajan, SS
Reviewer: Kavalali, E
DOI:

Regulation of beta-cell development
Author: Ferrer, J
Reviewer: Jensen, J
DOI:

Integrin cell surface interactions
Author: Geiger, B, Horwitz, R
Reviewer: Yamada, K, Humphries, MJ, Hynes, R
DOI: